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Variant ID | 638 |
---|---|
Genomic Coordinate (GRCh38) | g.22221744G>A |
Variant | c.1899+1G>A |
Variant Start Position | 1899 |
Location | Intron 18 |
Amino Acid Change | p.? |
ACMG Call | Pathogenic |
ACMG Call Last Revised Date | 4/28/2021 |
Predicted ACMG Call | Pathogenic | Effect Type | Splice donor |
Variant Type | Splicing |
PMID | 19219621, 34806794 |
Article Count | 2 |
Times Observed | 3-5 |
Clinical Phenotype | Other Musculoskeletal Abnormalities, Lower Limb Deformities, Gait abnormalities, Lower limb deformities |
ACMG Categories | pvs1, ps4m, pm2 |
ACMG Explanations | pvs1: This is a loss of function variant. pm2: chrX:22239861 ref:G alt:A was not found in gnomAD exomes or genomes. |
Variant in Clinvar | Yes |
ClinVar Classification | Pathogenic |
Categories In Literature | ps4m |
No Contrary Evidence Found | Yes |
ExAC Allele Frequency | - |
Thousand Genomes Allel Frequency | - |
Ontology Relations | - |
hg19 Mapping Failed | No |
Literature Alleles | X-22239861-G-A |
GnomAD Alleles | - |
DBNSFP Alleles | X-22239861-G-A |
Other Alleles | - |
Note | nan |
Warnings | - |